Table 1.

Summary of GSEA of Glioblastomas Compared with Established Cell Lines

Gene setsGenesAll cell lines
Glioma cell lines
In vivo
In vitro
ESNom pESNom pNom pNom p
BioCarta
    fatty_acid_metabolism25−0.5860.008*−0.5680.013*No0.724
    badPathway22−0.4960.019−0.4580.034No0.933
    dcPathway20−0.5250.028−0.4740.095No0.505
    par1Pathway18−0.5300.106−0.6200.011*0.766
    calcineurinPathway18−0.5390.047−0.4930.145No0.337
    nfatPathway52−0.3970.048−0.3580.144No0.490
Gene Ontology
    GPCRs_Class_B_Secretin-like24−0.4670.026−0.4800.0160.027No
Exp. sig.
    cell_adhesionExp. sig.−0.4360.002*−0.3850.009*0.042No
    ANTI_CD44_up23−0.4830.049−0.3530.3970.023No
STKE and others
    ST_adrenergic31−0.4470.068−0.4580.034No0.21
    SIG_PIP3_signaling_in_B_lymphocytes35−0.4910.037−0.4280.1371No0.133
  • Abbreviations: ES, enrichment score; Nom p, nominal P value; Exp. sig., expression signatures.

  • * Nominal P value of <0.01.

  • Gene set is not in the list.

  • Nominal P value of <0.05.